Jaeeon Lee

I am a postdoc in Nao Uchida's Lab at the MCB dept. I obtained my Ph.D at Harvard under Bernardo Sabatini in 2021. I am broadly interested in how animals 'learn-to-learn'. Currently, I'm exploring how the brain toggles between stable and flexible representation in order to compute value optimally, and how this process might be impaired through aging. I use a combination of behavioral analysis, in vivo electrophysiology, fiber photometry, combined with RNN modelling.

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profile photo

Upcoming talks

  • Jan 22, 2027   Mount Sinai Neuroscience Virtual Symposium
  • Mar 4, 2027   NYU SPiNES Seminar, New York, NY

Awards

Postdoctoral work

Emergence of rapid value inference through meta-reinforcement learning



Jaeeon Lee*

, Jay Hennig, Vanessa Frelih, Sam Gershman, Naoshige Uchida
BioRxiv, (submitted),

pdf

,

motion abstract



We show that meta-learning in value computation emerges through a transition from plasticity-based value update to recurrent dynamics-based value update. We developed a new RNN implementation with an online learning rule (T-BPTT) which mimics mouse behavior and display meta-learning via a transition from plasticity to dynamics-based value update. This transition to dynamics-based value allow both RNNs and mice to infer value using structural knowledge.

Ph.D work

From avoidance to new action: the multifaceted role of the striatal indirect pathway



Jaeeon Lee*

, Bernardo Sabatini
Nature Reviews Neuroscience(2025) ,

pdf



In this perspective, we discuss recent works regarding the function of striatal indirect pathway. We focus on two ideas: dopamine dependent learning rule in the indirect pathway, and the action switching phenotype. We propose that these two facets allows the indirect pathway to avoid non-optimal actions while exploring alternative actions.

Striatal indirect pathway mediates exploration via collicular competition



Jaeeon Lee*

, Bernardo Sabatini
Nature (2021) ,

pdf



We dissected the functional impact of stimulating the striatal D2 indirect pathway, on behavior and neural dynamics in a downstream region (colliculus). We show that D2 pathway can both suppress and trigger movement on the contra/ipsi side respectively. This can be explained by paradoxical excitation of contralateral SC. We propose a general circuit mechanism for exploration mediated by basal ganglia-collicular circuit.

Anatomically segregated basal ganglia pathways allow parallel behavioral modulation



Jaeeon Lee*

, Wengang Wang, Bernardo Sabatini
Nature Neuroscience (2020)

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We show topographical loops starting from striatum to Pf, VM and SC in the mouse brain. Segregated pathways in medial vs ventrolateral striatum modulate turning/licking behavior respectively, confirming parallel organization of BG output pathways.

Depth-resolved fiber photometry with a single tapered optical fiber implant



Filippo Pisano*, Marco Pisanello*, Suk Joon Lee,

Jaeeon Lee

, et al
Nature Methods (2019)

pdf



We show the application of tapered fibers in depth-selective photometry. We simultaneously recorded dopamine signals in dorsal/ventral striatum in the same mouse and show signals can diverge at specific behavioral events.




Design and source code from Jon Barron's website